Skip to main content
U.S. flag

An official website of the United States government

Here’s how you know

Dot gov

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

HTTPS

Secure .gov websites use HTTPS
A lock (LockA locked padlock) or https:// means you’ve safely connected to the .gov website. Share sensitive information only on official, secure websites.

    • Environmental Topics
    • Air
    • Bed Bugs
    • Cancer
    • Chemicals, Toxics, and Pesticide
    • Emergency Response
    • Environmental Information by Location
    • Health
    • Land, Waste, and Cleanup
    • Lead
    • Mold
    • Radon
    • Research
    • Science Topics
    • Water Topics
    • A-Z Topic Index
    • Laws & Regulations
    • By Business Sector
    • By Topic
    • Compliance
    • Enforcement
    • Laws and Executive Orders
    • Regulations
    • Report a Violation
    • Environmental Violations
    • Fraud, Waste or Abuse
    • About EPA
    • Our Mission and What We Do
    • Headquarters Offices
    • Regional Offices
    • Labs and Research Centers
    • Planning, Budget, and Results
    • Organization Chart
    • EPA History

Breadcrumb

  1. Home
  2. Choose Fish and Shellfish Wisely

Targeted EPA Fish Tissue Contamination Studies

The U.S. Environmental Protection Agency investigates the presence of chemicals in fish for which the risk to human health and the environment is unknown. These include contaminants of emerging concern such as pharmaceuticals and personal care products, perfluorinated compounds (used in a wide variety of household and industrial products) and polybrominated diphenyl ethers (widely used as flame retardants).

For more information about what the EPA is doing to improve our understanding on a number of contaminants in addition to the fish tissue studies associated with the National Aquatic Resource Surveys, refer to the following fact sheets and studies.

Use of Aluminum Foil for Fish Samples

Fish tissue contaminant studies require careful sample handling, wrapping, and storage to reduce the chance of cross-contamination. The objective of this study was to test whether “untreated” heavy-duty food-grade aluminum foil can be used instead of solvent-rinsed foil.

  • EPA Study Shows Aluminum Foil is an Unlikely Source of Mercury, PFAS, or PCB Contamination in Field-wrapped Fish Samples (pdf) (720.93 KB, April 2025, 822-F-25-007)

Polybrominated Diphenyl Ethers (PBDEs)

  • Contaminants of Emerging Concern (CECs) in Fish: Polybrominated Diphenyl Ethers (PBDEs) (pdf) (2.24 MB, September 2013, EPA 820-F-13-003)

Per- and Polyfluoroalkyl compounds or PFAS (formerly called perfluorinated compounds or PFCs)

  • Contaminants of Emerging Concern (CECs) in Fish: Perfluorinated Compounds (PFCs) (pdf) (1.65 MB, September 2013, EPA 820-F-13-005)

Pharmaceuticals and Personal Care Products (PPCPs)

The EPA initiated a pilot study of PPCPs in fish tissue in 2006. This study investigated the occurrence of PPCP chemicals in fish tissue at several stream locations across the country. The EPA partnered with Baylor University to conduct the study from 2006‐2008 and to publish the study results in 2009. Read the final report, fact sheet,  Quality Assurance Report, and Quality Assurance Project Plans.

  • Pilot Study of Pharmaceuticals and Personal Care Products (PPCPs) in Fish Tissue

Mercury and Selenium

The EPA collected and analyzed fish during 2007-2008 to assess levels of mercury at 95 randomly selected mercury advisory sites within the continental United States using a statistically based, regionally stratified design, where sites represented all major regions of the country. Methods established in the EPA’s Guidance for Assessing Chemical Contaminant Data for Use in Fish Advisories were used to collect and analyze fish fillet tissue for total mercury. Site samples comprise three composites of five fish per composite. Total selenium was also measured and is included in the dataset.

  • Final Database Data - Mercury and Selenium Levels in Fish at Selected Mercury Advisory Sites (2007-2008) (xlsx) (60 KB)

The EPA continued to analyze fish fillet tissue for mercury and selenium under the 2008-2009 National Rivers and Streams Assessment Fish Tissue Study. Results from the study are available on the EPA’s website.

  • 2008-2009 National Rivers and Streams Assessment Fish Tissue Study

In 2021, the EPA conducted a study to test the applicability of fillet biopsy plugs for monitoring fish tissue for selenium and mercury, and to better define the relationship between selenium or mercury concentrations in muscle plugs and muscle fillets. The EPA found that there were no statistically significant differences between log concentrations of fillet plugs and log concentrations of homogenized fillets at the community level. However, the authors of this study did caution that when using a selenium plug monitoring alternative, samplers must employ a sufficiently sensitive analytical method and consider total solids in the tissue samples.

  • An Evaluation of Fish Tissue Monitoring Alternatives for Mercury and Selenium: Fish Muscle Biopsy Samples Versus Homogenized Whole Fillets
  • Infographic summary of the study (pdf)

Choose Fish and Shellfish Wisely

  • Should I Be Concerned about Eating Fish and Shellfish?
  • EPA-FDA Advice about Eating Fish and Shellfish
  • Eat Fish and Shellfish in a Healthy Way
  • How Do I Know if a Fish I Caught is Contaminated?
  • What the EPA Does to Protect You From Contaminated Fish and Shellfish
  • Technical Resources and Studies
  • Building Fish and Shellfish Advisory Programs
    • Designing a Fish and Shellfish Contaminant Monitoring Program
      • Integrated Approach Monitoring Strategy
      • Multi-phase Approach Monitoring Strategy
      • Sampling Sites
      • Target Species and Size Classes
      • Target Contaminants
      • Sampling Times and Frequency
      • Fish Sample Types
      • Shellfish Sample Types
      • Quality Assurance and Quality Control
      • Sample Analysis
    • In the Field - Collecting and Handling Samples
      • Sample Collection
      • Sample Handling
    • In the Lab - Processing and Analyzing Samples
      • Receiving Samples
      • Processing Samples
      • Analytical Methods
      • Quality Assurance and Quality Control
      • Data Verification, Reporting and Validation
    • Analyzing Data and Calculating the Consumption Limits
    • Developing a Fish and/or Shellfish Advisory
Contact Us about Fish and Shellfish Consumption
Contact Us to ask a question, provide feedback, or report a problem.
Last updated on April 15, 2025
  • Assistance
  • Spanish
  • Arabic
  • Chinese (simplified)
  • Chinese (traditional)
  • French
  • Haitian Creole
  • Korean
  • Portuguese
  • Russian
  • Tagalog
  • Vietnamese
United States Environmental Protection Agency

Discover.

  • Accessibility Statement
  • Budget & Performance
  • Contracting
  • EPA www Web Snapshot
  • Grants
  • No FEAR Act Data
  • Plain Writing
  • Privacy
  • Privacy and Security Notice

Connect.

  • Data
  • Inspector General
  • Jobs
  • Newsroom
  • Regulations.gov
  • Subscribe
  • USA.gov
  • White House

Ask.

  • Contact EPA
  • EPA Disclaimers
  • Hotlines
  • FOIA Requests
  • Frequent Questions
  • Site Feedback

Follow.