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  2. National Pollutant Discharge Elimination System (NPDES)

Animal Feeding Operations - NPDES CAFO Permitting

AFOs Topics
  • AFOs Overview
  • NPDES CAFO Permitting
  • Regulations, Guidance, and Studies
  • Compendium of State Permits and Programs
  • Outreach and Education
  • Uses of Manure
  • Technology and Innovation
  • Understanding Nutrient Management Plans

Most states are authorized to issue NPDES permits. The operator of a concentrated animal feeding operation (CAFO) in an authorized state should request coverage from the appropriate state agency and utilize the appropriate state forms. See AFO State Contacts

EPA is the permitting authority in Massachusetts, New Hampshire, New Mexico, the District of Columbia, tribal lands, and U.S. territories (except for the U.S. Virgin Islands). CAFO operators in these jurisdictions should contact the appropriate EPA contact and use the following EPA forms to request permit coverage. See AFO EPA Headquarters or Regional Contacts 

  • NPDES Application Form 1: General Information (pdf) (3.47 MB) - General information application all facilities applying for an individual NPDES permit must submit, with the exception of POTWs, TWTDS, and MS4s serving a population greater than 100,000.
     
  • NPDES Application Form 2B: Concentrated Animal Feeding Operations and Concentrated Aquatic Animal Production Facilities (pdf) (3.75 MB) - Revised permit application to discharge wastewater from CAFOs and aquatic animal production facilities.

Annual NPDES CAFO Program Status Reports

EPA compiles annual summaries on the implementation status of the NPDES CAFO regulations. Reports include, for each state: total number of CAFOs, number of CAFOs with NPDES permits, and other information associated with implementation of the CAFO regulations.

  • NPDES CAFO Rule Implementation Status - National Summaries, 2011-2022

National Pollutant Discharge Elimination System (NPDES)

  • About NPDES
    • Permit Basics
    • State Program Information
    • Permit Limits
    • Program Management and Oversight
    • NPDES Regulations
    • Other Federal Laws that Apply to the NPDES Permit Program
  • All NPDES Program Areas
    • Animal Feeding Operations
    • Aquaculture
    • Forest Roads
    • Industrial Wastewater
    • Municipal Wastewater
      • Combined Sewer Overflows (CSOs)
      • Sanitary Sewer Overflows (SSOs)
      • Peak Flows
      • Integrated Planning
    • National Pretreatment Program
      • Standards and Requirements
      • Roles and Responsibilities
      • Events, Training and Webinars, and Publications
    • Pesticide Permitting
    • Stormwater
      • Construction Activities
      • Industrial Activities
      • Municipal Sources
      • Transportation Sources
      • Oil and Gas Permitting
      • Stormwater Planning
      • EPA's Residual Designation Authority
      • Rules and Notices
    • Water Quality Trading
  • NPDES Technical Resources
    • Resources for Permit Writers
    • NPDES Permit Writers' Manual
    • NPDES Training
    • Tools
    • Electronic Notice of Intent (eNOI)
    • NPDES Applications and Forms
Contact Us About NPDES
Contact Us to ask a question, provide feedback, or report a problem.
Last updated on March 21, 2025
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