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  2. Harmful Algal Blooms (HABs) in Water Bodies

Common Toxins Produced by Cyanobacteria, Dinoflagellates, and Diatoms

Related Information
Learn about Harmful Algae, Cyanobacteria and Cyanotoxins

A wide variety of taxa can produce toxins in fresh and marine waters. This page compiles and summarizes information on common toxins produced by cyanobacteria, dinoflagellates, and diatoms. Summaries are provided for common toxins that include their chemical structure, congeners, taxa known to produce each, mode of action, bioaccumulation potential, and human health impacts. Methods for toxin detection and measurement can be found in:

  • HAB Methods and Research
On this page:
  • Common Toxins Made by Cyanobacteria
  • Common Toxins Made by Dinoflagellates
  • Common Toxins Made by Diatoms
  • Tabular Information on Toxins and Associated Taxa
  • Guidance Values for Cyanotoxins Outside the United States

Common Toxins Made by Cyanobacteria

Microcystins

Microcystins chemical structure
Microcystin-LR

Microcystins are a group of monocyclic heptapeptides, characterized by two variable amino acids in the X and Y positions. They are the most common cyanobacterial toxin with over 200 known congeners. Microcystin-LR (MC-LR, L for leucine and R for arginine) is the most well-known form.

Microcystins are produced by a variety of cyanobacteria, including members of Dolichospermum (previously Anabaena), Fischerella, Gloeotrichia, Nodularia, Nostoc, Oscillatoria, Microcystis, and Planktothrix. They exist in both particulate (in cells) and dissolved forms in drinking and recreational water sources and bioaccumulate in common aquatic vertebrates and invertebrates such as zooplankton, mussels, and fish. Further, they can bioaccumulate in aquatic plants and inhibit growth and photosynthesis, in addition to causing general oxidative stress.

Microcystins are hepatotoxins that primarily affect the liver; however, there is evidence showing additional impact on the kidney and reproductive systems. Although there is evidence linking microcystin-LR with both liver and colorectal cancers through tumor promotion, the EPA has determined that there is inadequate information to assess carcinogenic potential of microcystins in humans. This is primarily due to the limitations in available human studies (i.e., potential co-exposure to other contaminants) and lack of long-term animal studies evaluating cancer following oral exposure. Additional human impacts include oxidative stress, immunotoxicity, and genotoxicity.

  • More information about human health effects

Cylindrospermopsin and Analogs

Cylindrospermopsin and Analogs chemical structure

Cylindrospermopsin is a tricyclic guanidine alkaloid (C15H21N5O7S). It is produced by species of cyanobacteria including Aphanizomenon, Dolichospermum (previously Anabaena), Microseira (previously Lyngbya), Raphidiopsis (previously Cylindrospermopsis), and Umezakia. Currently, there are several analogs, including 7-epi-cylindrospermopsin, 7-deoxy-cylindrospermopsin, 7-deoxy-desulfo-cylindrospermopsin, and 7-deoxy-desulfo-12-acetylcylindrospermopsin.

Based on previous mouse studies, the primary toxic effects occur to the liver and kidney; however, cylindrospermopsin can also increase cellular stress, influence developmental processes, and lead to DNA damage. Additional studies have further characterized this toxin to be a protein synthesis inhibitor. This toxin has been shown to bioaccumulate in both aquatic invertebrates and vertebrates, posing a greater risk for commercial and recreational fishing. Unfortunately, there is currently inadequate information to assess the carcinogenic potential of cylindrospermopsin.

  • For more information about health effects

Anatoxin-a, Homoanatoxin-a, and Natural Analogs

Anatoxin-a, Homoanatoxin-a, and Natural Analogs chemical structure

Anatoxins are secondary, bicyclic amine alkaloids (C10H15NO), and neurotoxins that bind to neuronal nicotinic acetylcholine receptors affecting the central nervous system.  Cyanobacteria genera known to produce this toxin include  Cylindrospermum, Chrysosporum (previously Anabaena), Cuspidothrix, Dolichospermum (previously Anabaena), Microcystis, Oscillatoria, Planktothrix, Phormidium, Raphidiopsis (previously Cylindrospermopsis), Tychonema, and Woronichinia.  There are multiple analogs, including anatoxin-a, homoanatoxin-a, and dihydroanatoxin, with anatoxin-a being the most common. Anatoxins primarily cause serious neurologic distress with signs ranging from loss of coordination to death due to respiratory failure. Originally, anatoxin-a was referred to as “very fast death factor” due to the rapid mortality of animals after ingestion. Further, there is information to suggest that anatoxins also bioaccumulate in various aquatic invertebrates and vertebrates. There is no information available on the carcinogenicity of anatoxin-a in humans or animals or on potential carcinogenic precursor effects.

  • For more information regarding human health effects of anatoxin-a
Guanitoxin (formerly known as Anatoxin-a(S)) chemical structure

Guanitoxin (formerly known as Anatoxin-a(S))

Guanitoxin, or Anatoxin-a(S), is a phosphorylated cyclic N-hydroxyguanidine (C7H17N4O4P), naturally occurring organophosphate, and neurotoxin that irreversibly inhibits acetylcholinesterase (AChE). It is typically produced by species of cyanobacteria including Dolichospermum (previously Anabaena). Since guanitoxins are neurotoxic, symptoms include convulsions, fasciculation, hypersalivation, and in more serious circumstances, death by respiratory arrest. Currently, there is limited information to assess Guanitoxin’s carcinogenicity.

Nodularin

Nodularin chemical structure

Nodularin is produced by cyanobacteria including species of Nodularia or Nostoc that primarily thrive in salt or brackish waters. Several (~10) congeners for nodularin exist, with nodularin-r being the most common. Like microcystin, nodularins impact the liver and are characterized as hepatotoxins; however, they also cause overall oxidative stress. Exposure primarily occurs from contaminated water; however, bioaccumulation in aquatic invertebrates and vertebrates can occur and lead to additional potential risk.  

Lyngbyatoxin chemical structure

Lyngbyatoxin

Lyngbyatoxin, is an alkaloid with the chemical formula C27H39N3O2, produced by cyanobacteria including Moorea producens (formerly Lyngbya majuscula). Lyngbyatoxins are tumor promotors from competitive binding to protein kinase C (PKC). Exposure typically results in acute dermatitis or “swimmer’s itch”, eye, or respiratory irritation. Since it is a tumor promotor, Lyngbyatoxin is categorized as carcinogenic.

Saxitoxins

Saxitoxins chemical structure

Saxitoxins are representative of a large toxin family referred to as the Paralytic Shellfish Poisoning (PSP) toxins. These toxins are produced from marine dinoflagellates including Alexandrium, Gymnodinium, and Pyrodinium and by freshwater cyanobacteria including species of Aphanizomenon, Dolichospermum (previously Anabaena), Microseira (previously Lyngbya), Planktothrix and Raphidiopsis. Saxitoxins are primarily neurotoxic. Exposure leads to blockage of sodium gated channels and membrane depolarization preventing transmission of action potential. Potential symptoms range from minor tingling and numbness to death from respiratory failure. Exposure to marine saxitoxins typically occurs through ingestion of contaminated shellfish. No information is available on the carcinogenicity of saxitoxins.

Beta-Methylamino-L-alanine

Beta-Methylamino-L-alanine chemical structure

Beta-Methylamino-L-alanine (BMAA) is a non-protein amino acid with a chemical formula of C4H10N2O2. It is produced by various species of cyanobacteria (i.e., Nostoc and Anabaena), diatoms (i.e., Thalassiosira sp. and Achnanthes sp.), and dinoflagellates (i.e., Heterocapsa triquetra and Gymnodinium catenatum). Exposure to BMAA causes neurotoxicity due to intraneuronal protein misfolding and can occur through the ingestion of contaminated shellfish. Effects range from convulsions to hypothesized increased risks for neurological diseases like ALS (amyotrophic lateral sclerosis) later in life. Currently there is no information to identify BMAA as a carcinogen.

Lipopolysaccharide Endotoxins (LPS)

Lipopolysaccharide Endotoxins (LPS) exist in the outer membrane of Gram-negative bacteria and are comprised of three main components: Lipid A, O-antigen, and a core polysaccharide. The chemical formula is C211H376N8O126P6 . Cyanobacterial species that produce LPS include Microcystis aeruginosa, Anabaena flos-aquae, Anacystis nidulans, and several others. Potential effects range from skin rashes to gastrointestinal or respiratory issues. Although, more information is needed to fully understand the potential health implications from cyanobacterial LPS. No information is currently available on LPS carcinogenicity.

Common Marine Toxins Made by Dinoflagellates

Brevetoxin

Brevetoxins chemical structure
Brevetoxin-A

Produced by Karenia brevis or “red tide”, brevetoxins are polycyclic polyethers, usually a variation of one of two structures (Structure A=C49H70O13 , Structure B=C50H70O14), that cause Neurotoxic Shellfish Poisoning (NSP). Brevetoxins are similar to ciguatoxins, but smaller in structure size. They are neurotoxins whose mode of action includes depolarization of the open voltage-gated sodium ion channels located in cell walls, eventually leading to increased sodium ions in the cell. The most common route of exposure is through oral ingestion of contaminated shellfish. Further, brevetoxins can be found in mollusks and fish that are non-filter feeders; although ingestion of these organisms typically does not cause neurotoxic shellfish poisoning because the toxins tend to bioaccumulate in inedible fatty organs. Symptoms associated with exposure include gastrointestinal issues (vomiting, diarrhea, abdominal pain), muscular pain, and potential loss of motor control with respiratory distress. Currently, there is no direct evidence of brevetoxin linked to carcinogenicity.

Ciguatoxin

Ciguatoxin chemical structure

Ciguatoxins are polycyclic polyethers produced by Gambierdiscus toxicus, a small marine dinoflagellate, that typically grows on and around coral reefs. Bioconcentration does occur as dinoflagellates are consumed by herbivorous fish, which are later consumed by humans, where the toxins cause Ciguatera Poisoning (CP). Symptoms of exposure include gastrointestinal (e.g., nausea, diarrhea, etc.), joint or muscle pain, fatigue, and numbness or tingling of fingers, toes, or mouth. No information is available to indicate ciguatoxin is carcinogenic.

Azaspiracid

Azaspiracid chemical structure

Azaspiracids (AZA) are polycyclic ether marine toxins with the chemical formula C47H71NO12 that cause Azaspiracid Shellfish Poisoning (AZP). They are produced by the dinoflagellates, Amphidona and Azadinium spinosum. Theses toxins inhibit endocytosis of plasma membrane proteins, considered cytotoxic, and can impact intracellular signaling molecules that are important for variety of internal pathways. AZA can accumulate in various shellfish, increasing potential exposure. Human consumption of contaminated shellfish can lead to severe nausea, diarrhea, and vomiting. Further studies are needed to identify the carcinogenic potential of this toxin.

Okadaic acid/Dinophysistoxin

Okadaic acid/Dinophysistoxin chemical structure

Okadaic Acid is a polyether toxin with the chemical formula C44H68O13. It is typically found in the dinoflagellates Dinophysis and Thorecta. This toxin induces apoptosis and is a potent inhibitor of serine/threonine phosphatases. Okadaic Acid tends to accumulate in marine sponges and shellfish. Exposure typically occurs from the ingestion of shellfish.

Symptoms primarily include gastrointestinal known as Diarrhetic Shellfish Poisoning (DSP). There is evidence to suggest that Okadaic Acids are potent tumor promotors; however, more evidence is still needed to confirm carcinogenicity.

Common Marine Toxins Made by Diatoms

Domoic Acid

Domoic Acid chemical structure

Domoic Acid (DA) causes Amnesic Shellfish Poisoning (ASP). It is a heterocyclic amino acid produced by Pseudo-nitzchia (Chemical formula: C15H21NO6). It acts as an agonist to glutamate receptors inducing membrane depolarization in Na+ ion channels, which eventually leads to cell death. Crustaceans, fish and shellfish are capable of accumulating elevated levels of domoic acid without apparent ill effects. Human ingestion of contaminated shellfish can lead to initial symptoms of gastroenteritis, followed by varying neurologic symptoms (e.g., dizziness, motor weakness, seizures, etc.). Further information is needed to determine DA’s carcinogenic potential.

Tabular Information on Toxins and Associated Taxa

Common Toxins and Associated Taxa

Toxin Group 

Toxin Produced 

Example Toxin Producing Species 

Anatoxins 

 

Anatoxin-a 

Anabaena sp., Aphanizomenon sp., Arthrospira fusiformis, Cuspidothrix issatschrnkoi, Raphidiopsis mediterranea (strain LBR148), Cylindrospermum sp., Dolichospermum flos-aquae, Dolichospermum macrosporum, Dolichospermum mendotae, Dolichospermum planctonicum, Dolichospermum spiroides, Microcoleus autumnalis, Oscillatoria sp., Phormidium cf. uncinatum, Phormidium favosum, Phormidium sp., Pseudanabaena, Tychonema variabilis  

Homoanatoxin-a 

Blennothrix lyngbyacea, Raphidiopsis mediterranea (strain LBR148), Oscillatoria sp., Phormidium cf. uncinatum, Phormidium forsum,  

Azaspiracids 

Azaspiracid 

Amphidoma languida, Azadinium dexteroporum, Azadinium poporum, Azadinium spinosum 

Ciguatoxins 

Ciguatoxin 

Gambierdiscus toxicus 

Cylindrospermopsins 

Cylindrospermopsins 

Anabaena lapponica, Aphanizomenon gracile, Aphanizomenon flos-aquae, Aphanizomenon ovalisporum, Cylindrospermopsis raciborskii, Dolichospermum mendotae, Anabaena lanctonica, Lyngbya wollei, Oscillatoria sp. (PCC-6407, -6506, -7936, -10702), Raphidiopsis curvata, Raphidiopsis mediterranea 

Deoxy-cylindrospemopsin 

Cylindrospermopsis raciborskii, Lyngbya wollei, Raphidiopsis curvata, Raphidiopsis mediterranea  

7-epi-cylindrospermopsin 

Oscillatoria sp. (PCC-6407, -6506, -7936, -10702) 

Microcystins 

Microcystin  

Anabaena sub-cylindrica (benthic), Anabaena sp., Anabaenopsis arnoldi, Anabaenopsis milleri, Annamia toxica, Aphanocapsa cumulus, Arthrospira fusiformis, Calothrix parietina, Anabaena circinalis, Anabaena flos-aquae, Anabaena flos-aquae f. lemmermannii (NIVA-CYA 83/1), Fischerella sp., Geitlerinema sp., Haplosiphon hiberniscus (soil extract strain), Plectonema boryanum (benthic), Leptolyngbya sp., Limnothix sp., Merismopedia sp., Microcystis aeruginosa, Microcystis bengalensis, Microcystis botrys, Microcystis flos-aquae, Microcystis ichthyoblabe, Microcystis novacekii, Microcystis panniformis, Microcystis pseudofilamentosa, Microcystis ramosa, Microcystis viridis, Nostoc spongiaeforme (benthic), Nostoc sp. (freshwater), Nostoc sp. (lichen associate), Nostoc sp. (benthic), Nostoc sp. (symbiont strains), Oscillatoria limosa (benthic), Oscillatoria tenuis,  
Phormidium corium (benthic), Phormidium sp. (marine strain), Planktothrix agardhii, Oscillatoria agardhii, Planktothrix agardhii, Planktothrix rubescens, Pseudanabaena sp. (marine strain), Radiocystis fernandoi, Spirulina sp. (marine strain), Synechococcus lividus, Synechococcus  sp., Trichormus variabilis 

Nodularins 

Nodularin 

Nodularia sphaerocarpa (PCC7804), Nodularia spumigena, Nostoc sp. (symbiont strains) 

Okadic acid 

Okadaic acid 

Dinophysis acuminata, Dinophysis acuta, Dinophysis caudata, Dinophysis fortii, Dinophysis infundibula, Dinophysis mils, Dinophysis norvegica, Dinophysis ovum, Dinophysis sacculus, Dinophysis tripos 

Saxitoxins 

Saxitoxin 

Aphanizomenon gracile, Aphanizomenon flos-aquae, Aphanizomenon issatschenkoi, Anabaena circinalis, Anabaena lemmermannii, Aphanizomenon sp. (strains NH-1, NH5, DC-1), Cylindrospermopsis raciborskii, Geitlerinema amphibium, Geitlerinema lemmermannii, Hydrocoleum sp., Lyngbya wollei, Lyngbya robusta, Limnothrix redekei, Phormidium sp., Scytonema cf. crispum, Trichodesmium erythraeum, 

Taxa Producing Less Common Toxins

Taxa 

Toxin Produced 

Toxicity Description 

Prymnesium parvum (“Golden Algae”) 

Believed to produce a number of toxins, including prymnesins 

 

Icthyotoxic; Known to damage the permeability of gill cells, altering their ability to exchange water and absorb oxygen 

Cochlodinium fulvescens (“Rust Tide”) 

Toxins have not been directly identified  

Ichthyotoxic 

Fibrocapsa japonica 

Produces hemolysin 

Ichthyotoxic and inducer of oxidative stress 

Gymnodiinium catenatum  

Produces Saxitoxin and analogues 

Neurotoxic 

Heterosigma akashiwo 

Potentially produces brevetoxins 

Ichthyotoxic 

Ostreopsis spp. 

Produces palytoxin and analogues (e.g., otreocins, ovatoxins, mascarenotoxins) 

Palytoxins disrupt Na+, K+, -ATPase pump  

Pfiesteria piscicida and Pfiesteria shumwayae 

Toxins have not been isolated and identified  

Toxicity is due to carbon-sulfur-metal based radical production 

Prorocentrum spp.  

Produce uncharacterized neurotoxin; other strains may produce okadaic acid and/or dinophysistoxin 

Can lead to neurotoxicity, or diarrhetic shellfish poisoning  

Takayama 

No specific toxins have been identified 

Ichthyotoxic 

Toxin Detection and Identification Techniques

Type of Identification Technique

Technology/ Technique used 

Toxins Identified 

Analytical 

Liquid chromotography with fluorescence detection 

HPLC and HPLC-FLD 

Anatoxin-a, Ciguatoxins, Cylindrospermopsins, Domoic Acid, Microcystins, Nodularins, Okadaic acid/dinophysistoxins, and Saxitoxins 

Liquid chromotography with mass spectrometry  

LC-MS, LC-MS/MS 

Anatoxin-a, Azaspiracids, Brevetoxins, Ciguatoxins, Cylindrospermopsins, Domoic Acid, Microcystins, Nodularins, Okadaic acid/dinophysistoxins, and Saxitoxins  

 

Gas chromatography with mass spectrometry 

GC-MS 

Anatoxin-a 

Capillary electrophoresis or liquid chromatography with UV spectroscopy  

CE-UV, HPLC-UV 

Anatoxin-a, Brevetoxins, Ciguatoxins, Cylindrospermopsins, Domoic Acid, Microcystins, and Nodularins  

In vivo 

Whole organism toxicity 

Insect/invertebrate assay and rodent bioassay 

Anatoxin-a, Brevetoxins, Cylindrospermopsins, Microcystins, Nodularins, Okadaic acid/dinophysistoxins, and Saxitoxins  

In vitro  

Antibodies 

Bead-based assay (i.e., Luminex), ELISA, and lateral flow assays   

Anatoxin-a, Azaspiracids, Brevetoxins, Ciguatoxins, Cylindrospermopsins, Domoic acids, Microcystins, Nodularins, Okadaic acid/dinophysistoxins, and Saxitoxins 

Cellular based assays (plate) 

Cytotoxicity assays, electron microscopy, and light microscopy 

Azaspiracids, Brevetoxins, Ciguatoxins, Microcystins, Nodularins, Okadaic acid/dinophysistoxins, and Saxitoxins   

Enzymatic activity 

Enzyme inhibition assay (plate) 

Anatoxin-a, Brevetoxins, Microcystins, Nodularins, and Okadaic acid/dinophysistoxins 

Pharmacological receptor  

Receptor binding assay (plate) 

Anatoxin-a, Brevetoxins, Ciguatoxins, Domoic Acid, and Saxitoxins,  

Guidance Values for Cyanotoxins Outside the United States

Guidance values, standards, or other national regulations/recommendations for oxins in drinking or surface waters outside the US.

Toxin 

Authority 

Drinking Water (μg/L) 

Recreational Water (μg/L) 

Anatoxin-a 

Australia, RWQMP (Low level) 

- 

<3 

Australia, RWQMP (Medium level) 

- 

≥3 

Australia, RWQMP (High level) 

- 

≥10 

Australia, RWQMP (Extreme level) 

- 

≥25 

Italian National Group for CRMWHC 

20 

- 

New Zealand PMAV (Homoanatoxin-a) 

6 

- 

Quebec PMAV, Canada 

3.7 

- 

WHO Guideline Values (provisional) 

30 

60 

Cylindrospermopsin  

Australia 

1.0 

- 

Brazil 

15 

- 

WHO Guideline Value (provisional) 

0.7 (long-term); 3 (short-term) 

6 

Microcystin 

Australia (Microcystin-LR) 

1.3 

- 

Australia (Total Microcystins) 

- 

≥10 

Brazil (Microcystin-LR) 

1 

- 

Canada (Microcystin-LR) 

1.5 

20 

Czech Republic (Microcystin-LR) 

1 

- 

Denmark (Microcystin-LR) 

1 

- 

Finland (Microcystin-LR, Raw water) 

>1 

- 

Finland (Microcystin-LR, Finished water) 

>10 

 

France (Microcystin-LR) 

1 

- 

Germany (Microcystin-LR) 

1 

- 

Italy (Microcystin-LR) 

1 

- 

Japan (Microcystin-LR) 

1 

- 

Korea (Microcystin-LR) 

1 

- 

Netherlands (Microcystin-LR) 

1 

- 

Norway (Microcystin-LR) 

1 

- 

New Zealand (Microcystin-LR) 

1 

- 

Poland (Microcystin-LR) 

1 

- 

South Africa (Microcystin-LR) 

1 

- 

Spain (Microcystin-LR) 

1 

- 

Turkey 

1 

<10 

Uruguay 

1 

- 

WHO Guideline Value (provisional)  

1 (long-term); 12 (short term) 

24 

Saxitoxin 

Brazil 

 

 

New Zealand PMAV 

1 

- 

WHO Guideline Value (provisional)  

3 

30 

Nodularin 

New Zealand PMAV 

1 

- 

Guanitoxin 

New Zealand PMAV 

1 

- 

Guidance Values, Standards, or other national regulations/recommendations for cyanotoxins in seafood

Toxin 

Authority 

Value  

Anatoxin 

California, USA 

1100 ng/g wet weight  

Azaspiracids 

EU 

16 ug/ 100 g of shellfish meat  

Cylindrospermopsin 

California, USA  

66 ng/g wet weight 

Victoria, Australia 

18-39 ug/kg whole organism  

Microcystin 

California, USA 

10 ng/g wet weight  

France (children) 

1.4 ug/kg fish tissue 

France (adults) 

5.6 ug/kg fish tissue 

Victoria, Australia 

24-51 ug/kg whole organism 

 

Saxitoxin 

Victoria, Australia 

800 ug/kg whole organism  

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